| 1990-1991 | 1991-1992 | 1992-1993 | 1993-1994 | 1994-1995 | 1995-1996 | 1996-1997 | 1997-1998 | 1998-1999 | 1999-2000 |
| Entrenador: Heynckes | Liga | Copa | C.EU | SC.ES | Total | |||||
| PJ |  |
PJ | |
PJ | |
PJ | |
PJ | |
|
| Cañizares | 26 | 0 | 0 | 0 | 6 | 0 | 2 | 0 | 34 | 0 |
| Roberto Carlos | 35 | 4 | 1 | 1 | 9 | 2 | 2 | 0 | 47 | 7 |
| Panucci | 23 | 1 | 1 | 0 | 8 | 1 | 1 | 0 | 33 | 2 |
| Hierro | 28 | 3 | 1 | 0 | 10 | 3 | 1 | 0 | 40 | 6 |
| Sanchis | 32 | 1 | 1 | 0 | 10 | 0 | 2 | 0 | 45 | 1 |
| Seedorf | 36 | 6 | 0 | 0 | 11 | 0 | 2 | 1 | 49 | 7 |
| Jaime | 31 | 0 | 1 | 0 | 9 | 0 | 2 | 0 | 43 | 0 |
| Redondo | 33 | 0 | 2 | 0 | 11 | 0 | 0 | 0 | 46 | 0 |
| Mijatovic | 24 | 10 | 0 | 0 | 8 | 1 | 2 | 1 | 34 | 12 |
| Suker | 29 | 10 | 1 | 1 | 7 | 4 | 2 | 0 | 39 | 15 |
| Raúl | 35 | 10 | 1 | 0 | 11 | 2 | 2 | 3 | 49 | 15 |
| Illgner | 12 | 0 | 2 | 0 | 5 | 0 | 0 | 0 | 19 | 0 |
| Morientes | 33 | 12 | 2 | 0 | 10 | 4 | 0 | 0 | 45 | 16 |
| Victor | 28 | 2 | 2 | 0 | 7 | 1 | 1 | 0 | 38 | 3 |
| Amavisca | 25 | 0 | 0 | 0 | 7 | 0 | 1 | 0 | 33 | 0 |
| Karanka | 18 | 0 | 2 | 0 | 5 | 0 | 2 | 0 | 27 | 0 |
| Guti | 17 | 1 | 1 | 0 | 2 | 0 | 2 | 0 | 22 | 1 |
| Karembeu | 16 | 0 | 2 | 0 | 5 | 3 | 0 | 0 | 23 | 3 |
| Savio | 12 | 3 | 1 | 0 | 2 | 0 | 0 | 0 | 15 | 3 |
| Dani | 8 | 0 | 2 | 0 | 1 | 0 | 1 | 0 | 12 | 0 |
| Fernando Sanz | 7 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 10 | 0 |
| Ze Roberto | 6 | 0 | 0 | 0 | 4 | 1 | 2 | 0 | 12 | 1 |
| Chendo | 4 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 7 | 0 |
| Rojas | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| Alvaro Benito | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| Secretario | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
